MCP serverio.github.cyanheads/ensembl-mcp-server

Look up genes, sequences, variants, homologs, and cross-database xrefs from Ensembl REST.

UNRATEDActivestreamable-httpensembl.caseyjhand.com

Overview

Score?

UNRATED 0.679

of what a free look can see, on 30 looks

Looks

last 15 hr ago

Tools

changed 9 days ago

More info

URL

ensembl.caseyjhand.com/mcp

streamable-http

Says it is

ensembl-mcp-server 0.5.0

protocol 2025-06-18

In the record since

32 days ago

Among servers18,413 with a card

0median 0.606 · this server 0.679 · highest on record 0.8561

Toolsfrom sha256:b17d4635b5…24c113 · +0 −0 9 days ago

The tools this server lists, read out of the definition it returned
Tool	Schema
ensembl_get_homology Find orthologs and/or paralogs of a gene across species. Returns each homolog's stable ID, species, homology type (ortholog_one2one, ortholog_one2many, paralog_many2many, etc.), pe	input · output
ensembl_get_sequence Fetch the DNA, cDNA, CDS, or protein sequence for a gene, transcript, protein, or genomic region. Returns a window of the sequence — the first 10,000 characters by default — with i	input · output
ensembl_get_xrefs Retrieve cross-database references for a gene or feature — HGNC, UniProt, EntrezGene, OMIM, RefSeq, Reactome, and others. Returns each xref with its database name, primary ID, disp	input · output
ensembl_list_species List species supported by Ensembl with display name, common name, assembly, taxon ID, and division. Required discovery step — species names like homo_sapiens are opaque to non-biol	input · output
ensembl_lookup_gene Resolve a gene by symbol + species (or by stable ID) to its Ensembl ID, genomic location (chr:start-end:strand), biotype, description, and transcript list. Entry point for most wor	input · output
ensembl_predict_variant Predict the functional consequences of a sequence variant using the Ensembl Variant Effect Predictor (VEP). Accepts three input formats: HGVS notation (transcript-relative, e.g. EN	input · output
ensembl_query_region Find genomic features overlapping a chromosomal region: genes, transcripts, variants, regulatory elements, or exons. Returns each feature with its stable ID, type, location, biotyp	input · output

Verify it yourselfnpx teppi-check https://ensembl.caseyjhand.com/mcpcurl -s https://api.teppi.xyz/v1/trust/mcp/mcs_01M1FZ2ESN4DX9T0RWWE7W88QA