MCP serverai.genomicintelligence/genomic-intelligence

Fetch a gene's reference sequence from Ensembl and store it. Returns a handle ({ref, name, length, preview, ...}). Pass the `ref` to predict_* tools — the bases st

Fetch a gene's sequence prepared for expression prediction. Resolves the gene's canonical-transcript TSS via Ensembl and stores a gene-sense sequence centred on it

Fetch a genomic region by coordinates from Ensembl and store it. For "find the genes in chr8:127,680,000-127,800,000"-style requests: resolves a coordinate range t

Find genes (transcript intervals) in a genomic region (async, ~8-25s). Takes 1,000–500,000 bp. The floor is the strictest of the scanning tasks: gene finding needs

Find genes in a sequence, then predict each gene's expression (composite). Server-side chaining in ONE call: finds genes (transcript intervals, with their TSS) in

Poll an async job once. Returns the {data, meta} result if complete, a progress envelope if still running, or an error envelope if it failed.

List the caller's recent async jobs (also available as gi://jobs/recent).

List available models for a task. Use to discover model ids before passing one as the `model` argument to a predict tool. The same catalog is also available

Load a bundled demo reference sequence and return a handle. The server ships one curated, task-correct positive control per task (list them via the gi://sequences

Chromatin annotation across 919 features (G0 DeepSEA). 200–500,000 bp. The model reads a 1,000 bp context window; 200–999 bp is accepted and scored against a padde

Predict enhancer activity (G0 DeepSTARR). 50–500,000 bp. 50 bp is the task's admission floor (the API 422s below it), not a statement about what the model reads: e

Predict a gene's expression from the sequence around its TSS. Expression is cell-type-specific, so `description` (cell type / assay context, e.g. 'K562 cell line')

Predict promoter regions (G0). 300–500,000 bp. Returns the {data, meta} envelope: data.regions lists predicted promoters with start/end/score. 300 bp is t

Predict splice donor/acceptor sites (G0 BigBird). 100–500,000 bp. The model reads a 15,000 bp context window, so anything shorter is scored against a padded window

Store a human-pasted sequence and return a handle to re-use it. For a sequence you've already pasted into the conversation, this gives back a short handle so you c